Gotland, Baltic Sea, Sweden
Peer-reviewed publications |
* means equal contribution
In the pipeline
[13] Fuentes-Pardo AP, Bourne C, Ruzzante DE (2022) Contrasting composition of northwest Atlantic herring aggregations within and outside the spawning season and evidence of admixture between reproductive components revealed by diagnostic SNPs (to be submitted to Ecology and Evolution)
[12] Fuentes-Pardo AP, Farell ED, Pettersson ME, Sprehn CG, Andersson L (2022) The genomic basis and environmental correlates of local adaptation in the Atlantic horse mackerel (Trachurus trachurus) (submitted to Evolutionary Applications)
[11] Pettersson ME, Fuentes-Pardo AP, Rochus CM, Enbody ED, Väinölä R, Andersson L (2022) Adaptive gene flow from Atlantic to Pacific herring in an arctic fjord in the Northeast Atlantic Ocean (under revision in Plos Biology)
Published
[10] Fuentes-Pardo AP, Bourne C, Singh R, Emond K, Pinkham L, McDermid JL, Andersson L, Ruzzante DE (2022) Adaptation to seasonal reproduction and thermal minima-related factors drives fine-scale divergence despite gene flow in Atlantic herring populations. bioRxiv, 578484. [DOI]
[9] Dorte Bekkevold, Florian Berg, Patrick Polte, Valerio Bartolino, Henn Ojaveer, Henrik Mosegaard, Edward D Farrell, Jelena Fedotova, Jakob Hemmer-Hansen, Bastian Huwer, Vanessa Trijoulet, Christoffer Moesgaard Albertsen, Angela P Fuentes-Pardo, Tomas Gröhsler, Mats Pettersson, Teunis Jansen, Arild Folkvord, Leif Andersson (2023) Mixed-stock analysis of Atlantic herring (Clupea harengus): a tool for identifying management units and complex migration dynamics. ICES Journal of Marine Science fsac223. [DOI]
[8] Chen J, Bi H, Pettersson ME, Sato DX, Fuentes-Pardo AP, Mo C, Younis S, Wallerman O, Jern P, Molés G, Gómez A, Kleinau G, Scheerer P, Andersson L (2021) Functional differences between TSHR alleles mediate variation in spawning season in Atlantic herring. Communications Biology 4(1):795. [DOI]
[7] Petrou EL, Fuentes-Pardo AP, Rogers LA, Orobko M, Tarpey C, Jiménez-Hidalgo I, Moss ML, Lepofsky D, Yang D, Pitcher TJ, Sandell T, Lowry D, Ruzzante DE, Hauser L (2021) Functional genetic diversity in an exploited marine species and its relevance to fisheries management. Proceedings of the Royal Society B 288: 20202398 [DOI]
[6] Han F, Jamsandekar M, Pettersson ME, Su L, Fuentes-Pardo AP, Davis BW, Bekkevold D, Berg F, Casini M, Dahle G, Farrell ED, Folkvord A, Andersson L (2020) Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci. eLife 2020;9:e61076. [DOI]
[5] Kerr Q, Fuentes‐Pardo AP, Kho J, McDermid JL, Ruzzante DE (2019) Temporal stability and assignment power of adaptively divergent genomic regions between herring (Clupea harengus) seasonal spawning aggregations. Ecology and evolution 9(1):500-510. [DOI]
[4] Fuentes-Pardo AP, Ruzzante DE (2017) Whole-genome sequencing approaches for conservation biology: advantages, limitations, and practical recommendations. Molecular Ecology 2017; 26:5369–5406. [PDF] [DOI]
[3] Lamichhaney S*, Fuentes-Pardo AP*, Rafati N, Ryman N, McCracken GR, Bourne C, Singh R, Ruzzante DE, Andersson L (2017) Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean. Proceedings of the National Academy of Sciences 114(17): E3452-E3461. [PDF] [DOI]
[2] Sánchez JA, Fuentes-Pardo AP, Almhain ÍN, Ardila-Espitia NE, Cantera-Kintz J, Forero-Shelton M (2016) The masquerade game: marine mimicry adaptation between egg-cowries and octocorals. PeerJ 4:e2051. [PDF] [DOI]
[1] Guauque-Olarte S, Fuentes-Pardo AP, Cárdenas-Henao H, Barreto G (2010) Diversidad y estructura genética de tres poblaciones afrodescendientes del Suroccidente Colombiano a partir de 8 STR’s. Acta Biológica Colombiana 15(2): 47-59. [PDF] [DOI]
In the pipeline
[13] Fuentes-Pardo AP, Bourne C, Ruzzante DE (2022) Contrasting composition of northwest Atlantic herring aggregations within and outside the spawning season and evidence of admixture between reproductive components revealed by diagnostic SNPs (to be submitted to Ecology and Evolution)
[12] Fuentes-Pardo AP, Farell ED, Pettersson ME, Sprehn CG, Andersson L (2022) The genomic basis and environmental correlates of local adaptation in the Atlantic horse mackerel (Trachurus trachurus) (submitted to Evolutionary Applications)
[11] Pettersson ME, Fuentes-Pardo AP, Rochus CM, Enbody ED, Väinölä R, Andersson L (2022) Adaptive gene flow from Atlantic to Pacific herring in an arctic fjord in the Northeast Atlantic Ocean (under revision in Plos Biology)
Published
[10] Fuentes-Pardo AP, Bourne C, Singh R, Emond K, Pinkham L, McDermid JL, Andersson L, Ruzzante DE (2022) Adaptation to seasonal reproduction and thermal minima-related factors drives fine-scale divergence despite gene flow in Atlantic herring populations. bioRxiv, 578484. [DOI]
[9] Dorte Bekkevold, Florian Berg, Patrick Polte, Valerio Bartolino, Henn Ojaveer, Henrik Mosegaard, Edward D Farrell, Jelena Fedotova, Jakob Hemmer-Hansen, Bastian Huwer, Vanessa Trijoulet, Christoffer Moesgaard Albertsen, Angela P Fuentes-Pardo, Tomas Gröhsler, Mats Pettersson, Teunis Jansen, Arild Folkvord, Leif Andersson (2023) Mixed-stock analysis of Atlantic herring (Clupea harengus): a tool for identifying management units and complex migration dynamics. ICES Journal of Marine Science fsac223. [DOI]
[8] Chen J, Bi H, Pettersson ME, Sato DX, Fuentes-Pardo AP, Mo C, Younis S, Wallerman O, Jern P, Molés G, Gómez A, Kleinau G, Scheerer P, Andersson L (2021) Functional differences between TSHR alleles mediate variation in spawning season in Atlantic herring. Communications Biology 4(1):795. [DOI]
[7] Petrou EL, Fuentes-Pardo AP, Rogers LA, Orobko M, Tarpey C, Jiménez-Hidalgo I, Moss ML, Lepofsky D, Yang D, Pitcher TJ, Sandell T, Lowry D, Ruzzante DE, Hauser L (2021) Functional genetic diversity in an exploited marine species and its relevance to fisheries management. Proceedings of the Royal Society B 288: 20202398 [DOI]
[6] Han F, Jamsandekar M, Pettersson ME, Su L, Fuentes-Pardo AP, Davis BW, Bekkevold D, Berg F, Casini M, Dahle G, Farrell ED, Folkvord A, Andersson L (2020) Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci. eLife 2020;9:e61076. [DOI]
[5] Kerr Q, Fuentes‐Pardo AP, Kho J, McDermid JL, Ruzzante DE (2019) Temporal stability and assignment power of adaptively divergent genomic regions between herring (Clupea harengus) seasonal spawning aggregations. Ecology and evolution 9(1):500-510. [DOI]
[4] Fuentes-Pardo AP, Ruzzante DE (2017) Whole-genome sequencing approaches for conservation biology: advantages, limitations, and practical recommendations. Molecular Ecology 2017; 26:5369–5406. [PDF] [DOI]
[3] Lamichhaney S*, Fuentes-Pardo AP*, Rafati N, Ryman N, McCracken GR, Bourne C, Singh R, Ruzzante DE, Andersson L (2017) Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean. Proceedings of the National Academy of Sciences 114(17): E3452-E3461. [PDF] [DOI]
[2] Sánchez JA, Fuentes-Pardo AP, Almhain ÍN, Ardila-Espitia NE, Cantera-Kintz J, Forero-Shelton M (2016) The masquerade game: marine mimicry adaptation between egg-cowries and octocorals. PeerJ 4:e2051. [PDF] [DOI]
[1] Guauque-Olarte S, Fuentes-Pardo AP, Cárdenas-Henao H, Barreto G (2010) Diversidad y estructura genética de tres poblaciones afrodescendientes del Suroccidente Colombiano a partir de 8 STR’s. Acta Biológica Colombiana 15(2): 47-59. [PDF] [DOI]
Invited speaker
2021. Talk entitled "When is whole-genome sequencing necessary in conservation biology? Lessons learned from aquatic organisms". Berlin Center for Genomics in Biodiversity Research (BeGenDiv) Seminar Series, Berlin, Germany (online).
2017. Talk on "Whole-genome sequencing applications in conservation", as part of the Molecular Ecology course (BIOL 3042.03). Dalhousie University, Canada
2017. Talk on "Whole-genome sequencing applications in conservation", as part of the Genomics and Bioinformatics course (EBIO 6660). Tulane University, USA. Instructor: Dr. Lorena Torrez Martinez (online).
2015. Talk on "How the knowledge of DNA variation of fish populations can help us to improve fishery management", as part of the Women in Natural Sciences (WINS) talk series. Nova Scotia Community College (NSCC), Halifax, Nova Scotia, Canada. Instructor: Dr. Dave Keith.
2015. Talk entitled "Diferenciación genética adaptativa asociada al tiempo de reproducción en poblaciones de arenque (Clupea harengus) del Atlántico Norte". Postgraduate Studies in Science Biology Seminar series, Department of Biology, Universidad del Valle, Cali, Colombia.
2015. Adaptive and neutral genetic variation in spring- and fall-spawning herring (Clupea harengus) in the Northwest Atlantic. Herring Assessment 2015, Bedford Institute of Oceanography (BIO), Dartmouth, Canada.
2017. Talk on "Whole-genome sequencing applications in conservation", as part of the Molecular Ecology course (BIOL 3042.03). Dalhousie University, Canada
2017. Talk on "Whole-genome sequencing applications in conservation", as part of the Genomics and Bioinformatics course (EBIO 6660). Tulane University, USA. Instructor: Dr. Lorena Torrez Martinez (online).
2015. Talk on "How the knowledge of DNA variation of fish populations can help us to improve fishery management", as part of the Women in Natural Sciences (WINS) talk series. Nova Scotia Community College (NSCC), Halifax, Nova Scotia, Canada. Instructor: Dr. Dave Keith.
2015. Talk entitled "Diferenciación genética adaptativa asociada al tiempo de reproducción en poblaciones de arenque (Clupea harengus) del Atlántico Norte". Postgraduate Studies in Science Biology Seminar series, Department of Biology, Universidad del Valle, Cali, Colombia.
2015. Adaptive and neutral genetic variation in spring- and fall-spawning herring (Clupea harengus) in the Northwest Atlantic. Herring Assessment 2015, Bedford Institute of Oceanography (BIO), Dartmouth, Canada.
Presentations in scientific events
2019. (to complete)
2018. (to complete)
2017. Fuentes-Pardo et al. Fine-scale genome-wide analysis of spawning herring (Clupea harengus) populations in the Northwest Atlantic. 12th Annual meeting of the Canadian Society for Ecology & Evolution (CSEE), Victoria, BC, Canada. (Oral presentation)
2017. Fuentes-Pardo et al. Whole-genome resequencing for the conservation of natural populations: Perspectives, limits and recommendations. 10th Dr. Patrick Lett Symposium, Biology Organization of Graduate Students (BOGS), Dalhousie University, Halifax, NS, Canada. (Oral presentation)
2016. Fuentes-Pardo et al. Genetic differentiation associated with reproductive seasonality of herring populations across the North Atlantic. International Symposium of the Fisheries Society of the British Isles (FSBI), Bangor, UK. (Oral presentation)
2016. Fuentes-Pardo et al. Genomic differences associated with spawning seasonality in Atlantic herring. 11th Annual meeting of the Canadian Society for Ecology & Evolution (CSEE), St John’s, NL, Canada. (Oral presentation)
2016. Fuentes-Pardo et al. Genetic differentiation associated with reproductive seasonality of herring populations across the North Atlantic. Canadian Conference of Fisheries Research (CCFFR), St John’s, NL, Canada. (Oral presentation)
2014. Fuentes-Pardo et al. Population genomics of spawning herring in the North West Atlantic using SNPs. First Joint Conference Genomes to/aux Biomes Montreal 2014, Montreal, QC, Canada. (Poster presentation)
2012. Fuentes-Pardo et al. Examining coevolution between marine snails Neosimnia
(Gastropoda:Ovulidae) and octocorals (Pacifigorgia and Leptogorgia:Octocorallia) in the Tropical Eastern Pacific. 1st Joint Conference on Evolutionary Biology, Ottawa, ON, Canada. (Poster presentation)
2008. Fuentes-Pardo et al. DNA analysis of uniparental and biparental markers of the isolated afro-descendant population from Mulalo, Valle del Cauca. XLIII National Congress of Biological Sciences, Yopal, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Analysis of genetic diversity of five isolated afro-descendant populations from Colombian west using six autosomic microsatellite systems. XLIII National Congress of Biological Sciences, Yopal, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Allelic frequencies of 11 STR systems in three afro-descendant populations from Colombian southwest. I Latin-American Congress of Human Genetics, IX Colombian Congress of Genetics, Cartagena, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Genetic composition of eight afro-descendant populations from the Pacific coast of Colombia using STRs. I Latin-American Congress of Human Genetics, IX Colombian Congress of Genetics, Cartagena, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Assessment of structure and genetic diversity of human populations from middle and southwest of Colombia. 13th Latin-American Congress on Genetics, VI Peruvian Congress of Genetics, Lima, Perú. (Oral presentation)
2008. Fuentes-Pardo et al. The effect of the anthropogenic intervention on a bird community in a dry tropical forest, Caloto - Cauca. II Colloquium on Experimental Ecology at the Department of Biology, Universidad del Valle, Cali, Colombia. (Oral presentation)
2018. (to complete)
2017. Fuentes-Pardo et al. Fine-scale genome-wide analysis of spawning herring (Clupea harengus) populations in the Northwest Atlantic. 12th Annual meeting of the Canadian Society for Ecology & Evolution (CSEE), Victoria, BC, Canada. (Oral presentation)
2017. Fuentes-Pardo et al. Whole-genome resequencing for the conservation of natural populations: Perspectives, limits and recommendations. 10th Dr. Patrick Lett Symposium, Biology Organization of Graduate Students (BOGS), Dalhousie University, Halifax, NS, Canada. (Oral presentation)
2016. Fuentes-Pardo et al. Genetic differentiation associated with reproductive seasonality of herring populations across the North Atlantic. International Symposium of the Fisheries Society of the British Isles (FSBI), Bangor, UK. (Oral presentation)
2016. Fuentes-Pardo et al. Genomic differences associated with spawning seasonality in Atlantic herring. 11th Annual meeting of the Canadian Society for Ecology & Evolution (CSEE), St John’s, NL, Canada. (Oral presentation)
2016. Fuentes-Pardo et al. Genetic differentiation associated with reproductive seasonality of herring populations across the North Atlantic. Canadian Conference of Fisheries Research (CCFFR), St John’s, NL, Canada. (Oral presentation)
2014. Fuentes-Pardo et al. Population genomics of spawning herring in the North West Atlantic using SNPs. First Joint Conference Genomes to/aux Biomes Montreal 2014, Montreal, QC, Canada. (Poster presentation)
2012. Fuentes-Pardo et al. Examining coevolution between marine snails Neosimnia
(Gastropoda:Ovulidae) and octocorals (Pacifigorgia and Leptogorgia:Octocorallia) in the Tropical Eastern Pacific. 1st Joint Conference on Evolutionary Biology, Ottawa, ON, Canada. (Poster presentation)
2008. Fuentes-Pardo et al. DNA analysis of uniparental and biparental markers of the isolated afro-descendant population from Mulalo, Valle del Cauca. XLIII National Congress of Biological Sciences, Yopal, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Analysis of genetic diversity of five isolated afro-descendant populations from Colombian west using six autosomic microsatellite systems. XLIII National Congress of Biological Sciences, Yopal, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Allelic frequencies of 11 STR systems in three afro-descendant populations from Colombian southwest. I Latin-American Congress of Human Genetics, IX Colombian Congress of Genetics, Cartagena, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Genetic composition of eight afro-descendant populations from the Pacific coast of Colombia using STRs. I Latin-American Congress of Human Genetics, IX Colombian Congress of Genetics, Cartagena, Colombia. (Poster presentation)
2008. Fuentes-Pardo et al. Assessment of structure and genetic diversity of human populations from middle and southwest of Colombia. 13th Latin-American Congress on Genetics, VI Peruvian Congress of Genetics, Lima, Perú. (Oral presentation)
2008. Fuentes-Pardo et al. The effect of the anthropogenic intervention on a bird community in a dry tropical forest, Caloto - Cauca. II Colloquium on Experimental Ecology at the Department of Biology, Universidad del Valle, Cali, Colombia. (Oral presentation)
